getInteractions

getInteractions,comradesDataSet-method

This method returns a table interactions of an RNA (interactor) on the RNA of
interest use topInteracters.

Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.

Jonathan Price

comradesOO

Analysis of COMRADES (Cross-Linking Matched RNA and Deep
Sequencing) Data

getInteractions function

<dl><dt>cds</dt>
<dd>a <code>comradesDataSet</code> object</dd>
<dt>interactor</dt>
<dd>The rna to show interactions with</dd></dl>

Arguments

getInteractions — getInteractions

<dl>

<dt>cds</dt>
<dd>a <code>comradesDataSet</code> object</dd>


<dt>interactor</dt>
<dd>The rna to show interactions with</dd>

</dl>

getInteractions: getInteractions

Description

Usage

Value

Arguments

Examples