comradesOO (version 0.1.1)

readNumbers: readNumbers

Description

This method prints a table showing the number of duplexes in the clusters in each step of the analysis

Usage

readNumbers(knowClusteredCds, rna)

Value

A data.frame shoing the number of reads in clusters for each sample

Arguments

knowClusteredCds

A comradesDataSet object after clustering has been performed

rna

The RNA ID of interest - use rna(cdsObject).

Examples

cds = makeExampleComradesDataSet()

clusteredCds = clusterComrades(cds,
                cores = 1,
                stepCount = 1,
                clusterCutoff = 1)
readNumbers(clusteredCds)