topInteracters

topInteracters,comradesDataSet-method

This method prints the top transcripts that have the most duplexes
assigned that interact with the transcript of interest

Analysis of RNA crosslinking data for RNA structure prediction. The package is suitable for the analysis of RNA structure cross-linking data and chemical probing data.

Jonathan Price

comradesOO

Analysis of COMRADES (Cross-Linking Matched RNA and Deep
Sequencing) Data

topInteracters function

<dl><dt>cds</dt>
<dd>a <code>comradesDataSet</code> object</dd>
<dt>ntop</dt>
<dd>the number of entries to display</dd></dl>

Arguments

topInteracters — topInteracters

<dl>

<dt>cds</dt>
<dd>a <code>comradesDataSet</code> object</dd>


<dt>ntop</dt>
<dd>the number of entries to display</dd>

</dl>

topInteracters: topInteracters

Description

Usage

Value

Arguments

Examples