OrientationFrame

OrientationFrame-class

a matrix of two character vectors that represent the orientation of contigs. 
The first element of thismatrix is the contigs name
The second element is the orinetation (as either + or -).

orientation

This class is a matrix of two character vectors that represent the orientation of contigs. 
 The first element of thismatrix is the contigs name
 The second element is the orinetation (as either + or -).<p></p><p>Constructor for OrientationFrame</p>

Using strand inheritance data from multiple single cells
        from the organism whose genome is to be assembled, contiBAIT
        can cluster unbridged contigs together into putative
        chromosomes, and order the contigs within those chromosomes.

Kieran ONeill

contiBAIT

Improves Early Build Genome Assemblies using Strand-Seq Data

OrientationFrame-class function

This class is a matrix of two character vectors that represent the orientation of contigs. 
 The first element of thismatrix is the contigs name
 The second element is the orinetation (as either + or -).

Constructor for OrientationFrame

OrientationFrame-class: A class for storing contig orientations

Description

Usage

Arguments

Value

Examples