cophe.prepare.dat.single

internal

A Bayesian method for Phenome-wide association studies (PheWAS) that identifies causal associations between genetic variants and traits, while simultaneously addressing confounding due to linkage disequilibrium. For details see
Manipur et al (2024, Nature Communications) <doi:10.1038/s41467-024-49990-8>.

Ichcha Manipur

cophescan

Adaptation of the Coloc Method for PheWAS

Chris Wallace

cophe.prepare.dat.single function

<dl><dt>dataset</dt>
<dd>a list with specifically named elements defining the query trait dataset
to be analysed.</dd>
<dt>querysnpid</dt>
<dd>Id of the query variant, (id in dataset$snp)</dd></dl>

Arguments

Author

Prepare data for cophe.single — cophe.prepare.dat.single

<dl>

<dt>dataset</dt>
<dd>a list with specifically named elements defining the query trait dataset
to be analysed.</dd>


<dt>querysnpid</dt>
<dd>Id of the query variant, (id in dataset$snp)</dd>

</dl>

cophe.prepare.dat.single: Prepare data for cophe.single

Description

Usage

Value

Arguments

Author