logd_beta

A Bayesian method for Phenome-wide association studies (PheWAS) that identifies causal associations between genetic variants and traits, while simultaneously addressing confounding due to linkage disequilibrium. For details see
Manipur et al (2024, Nature Communications) <doi:10.1038/s41467-024-49990-8>.

Ichcha Manipur

cophescan

Adaptation of the Coloc Method for PheWAS

Chris Wallace

logd_beta function

<dl><dt>b</dt>
<dd>current beta</dd>
<dt>beta_shape</dt>
<dd>prior for the shape (gamma distibution) of beta</dd>
<dt>beta_scale</dt>
<dd>prior for the scale of beta</dd></dl>

Arguments

dgamma for beta — logd_beta

<dl>

<dt>b</dt>
<dd>current beta</dd>


<dt>beta_shape</dt>
<dd>prior for the shape (gamma distibution) of beta</dd>


<dt>beta_scale</dt>
<dd>prior for the scale of beta</dd>

</dl>

logd_beta: dgamma for beta

Description

Usage

Value

Arguments