logd_gamma

A Bayesian method for Phenome-wide association studies (PheWAS) that identifies causal associations between genetic variants and traits, while simultaneously addressing confounding due to linkage disequilibrium. For details see
Manipur et al (2024, Nature Communications) <doi:10.1038/s41467-024-49990-8>.

Ichcha Manipur

cophescan

Adaptation of the Coloc Method for PheWAS

Chris Wallace

logd_gamma function

<dl><dt>g</dt>
<dd>current gamma</dd>
<dt>gamma_shape</dt>
<dd>prior for the shape (gamma distibution) of gamma</dd>
<dt>gamma_scale</dt>
<dd>prior for the scale of gamma</dd></dl>

Arguments

dgamma for gamma — logd_gamma

<dl>

<dt>g</dt>
<dd>current gamma</dd>


<dt>gamma_shape</dt>
<dd>prior for the shape (gamma distibution) of gamma</dd>


<dt>gamma_scale</dt>
<dd>prior for the scale of gamma</dd>

</dl>

logd_gamma: dgamma for gamma

Description

Usage

Value

Arguments