computeRandomSelection

The function <code>computeRandomSelection</code> is used internally by
the <code>CoreCollection</code> object.

internal

Create a custom sized Core Collection based on a distance matrix and applying
the A-NE (accession nearest entry), E-NE (entry nearest entry) or E-E (entry entry) method
as introduced in Jansen and van Hintum (2007) <doi:10.1007/s00122-006-0433-9> and
further elaborated on in Odong, T.L. (2012) <https://edepot.wur.nl/212422>.
Optionally a list of preselected accessions to be included into the core can be set.
For each accession in the computed core, if available nearby accessions are retrievable
that can be used as an alternative.

Matthijs Brouwer

coreCollection

Core Collection

Reinhoud Blok, de

computeRandomSelection function

<dl><dt>dist</dt>
<dd>distance matrix, used for distances and implicitly defining the set of entries</dd>
<dt>requiredN</dt>
<dd>the required size of the random selection</dd>
<dt>preselected</dt>
<dd>a list of preselected entries, referring to the row/column of <code>dist</code></dd>
<dt>seed</dt>
<dd>the applied seed for the randomizer</dd></dl>

Arguments

Compute a random selection — computeRandomSelection

<dl>

<dt>dist</dt>
<dd>distance matrix, used for distances and implicitly defining the set of entries</dd>


<dt>requiredN</dt>
<dd>the required size of the random selection</dd>


<dt>preselected</dt>
<dd>a list of preselected entries, referring to the row/column of <code>dist</code></dd>


<dt>seed</dt>
<dd>the applied seed for the randomizer</dd>

</dl>

computeRandomSelection: Compute a random selection

Description

Usage

Arguments

Details