corehunter (version 3.0.1)

coreHunterData: Initialize Core Hunter data.

Description

The data may contain genotypes, phenotypes and/or a precomputed distance matrix. All provided data should describe the same individuals which is verified by comparing the item ids and names.

Usage

coreHunterData(genotypes, phenotypes, distances)

Arguments

genotypes

Genetic marker data (chgeno).

phenotypes

Phenotypic trait data (chpheno).

distances

Precomputed distance matrix (chdist).

Value

Core Hunter data (chdata) with elements

Core Hunter data of class chdata.

See Also

genotypes, phenotypes, distances

Examples

geno.file <- system.file("extdata", "genotypes.csv", package = "corehunter")
pheno.file <- system.file("extdata", "phenotypes.csv", package = "corehunter")
dist.file <- system.file("extdata", "distances.csv", package = "corehunter")

my.data <- coreHunterData(
  genotypes(file = geno.file),
  phenotypes(file = pheno.file),
  distances(file = dist.file)
)