cor2

<p>Phased haplotype matrix, rows as samples and columns as SNPs</p>

Using a computationally efficient method, the package can
be used to find the corrected coverage estimate of a credible set
of putative causal variants from Bayesian genetic fine-mapping.
The package can also be used to obtain a corrected credible set
if required; that is, the smallest set of variants required such
that the corrected coverage estimate of the resultant credible set is
within some user defined accuracy of the desired coverage.
Maller et al. (2012) <doi:10.1038/ng.2435>,
Wakefield (2009) <doi:10.1002/gepi.20359>,
Fortune and Wallace (2018) <doi:10.1093/bioinformatics/bty898>.

Anna Hutchinson

corrcoverage

Correcting the Coverage of Credible Sets from Bayesian Genetic
Fine Mapping

cor2: Correlation matrix of SNPS

Description

Usage

Arguments

Value

Details