QmatrixFilt-class

The S4 class QmatrixFilt lists for Q matrix correlation output

structure

Q matrix

Qmatrix

QmatrixFilt

Statistical summary of STRUCTURE output. STRUCTURE is a K-means clustering method for inferring population structure and assigning individuals to populations using genetic data. Pritchard JK, Stephens M, Donnelly PJ (2000) <DOI:10.1093/genetics/155.2.945>. <https://web.stanford.edu/group/pritchardlab/structure.html>.

Michael Campana

corrsieve

Software for Summarising and Evaluating STRUCTURE Output

QmatrixFilt function

Objects can be created by calls of the form <code>new("QmatrixFilt", ...)</code>.

Objects from the Class

<dl class="dl-horizontal">
	<dt>rowncol</dt><dd>A list listing filtered Q matrix correlations by the rows-and-columns method</dd>
	<dt>avmaxcorr</dt><dd>A table listing filtered Q matrix correlations by the rows-and-columns method</dd>
	<dt>rawcorr</dt><dd>A list listing raw Q matrix correlations</dd>
</dl>

Slots

QmatrixFilt — QmatrixFilt

<dl class='dl-horizontal'>
	<dt>rowncol</dt><dd>A list listing filtered Q matrix correlations by the rows-and-columns method</dd>
	<dt>avmaxcorr</dt><dd>A table listing filtered Q matrix correlations by the rows-and-columns method</dd>
	<dt>rawcorr</dt><dd>A list listing raw Q matrix correlations</dd>
</dl>

QmatrixFilt: QmatrixFilt

Description

Arguments

Objects from the Class

Slots

See Also