SBS96_ID_to_SBS192_ID

"-E" added to the name of a transcriptional strand bias
signature indicates that it was extracted only from exome sequencing data,
and thus reflects transcriptional strand bias in the exome rather than in
the entire transcript, including introns.

A data package with 2 main package variables: 'signature' and 'etiology'.
The 'signature' variable contains the latest mutational signature profiles
released on COSMIC <https://cancer.sanger.ac.uk/signatures/> for 3 mutation
types:
* Single base substitutions in the context of preceding and following bases,
* Doublet base substitutions, and
* Small insertions and deletions.
The 'etiology' variable provides the known or hypothesized causes of signatures.
'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more
information.

Steven Rozen

cosmicsig

Mutational Signatures from COSMIC (Catalogue of Somatic
Mutations in Cancer)

Nanhai Jiang

SBS96_ID_to_SBS192_ID function

<dl><dt>sig_ids</dt>
<dd>Character vector of SBS96 signature IDs.</dd></dl>

Arguments

Translate SBS96 signature IDs to SBS192 signature IDs by adding "-E" if necessary — SBS96_ID_to_SBS192_ID

<dl>

<dt>sig_ids</dt>
<dd>Character vector of SBS96 signature IDs.</dd>

</dl>

SBS96_ID_to_SBS192_ID: Translate SBS96 signature IDs to SBS192 signature IDs by adding "-E" if necessary

Description

Usage

Value

Arguments

Examples