show

show-methods

show,VEGASResult-method

show,GLOSSIResult-method


 ~~ Methods for function <code>show</code> in package <span class="pkg">base</span> ~~


methods

summary-methods

Gene set analysis methods exist to combine SNP-level
association p-values into gene sets, calculating a single
association p-value for each gene set. This package implements
two such methods that require only the calculated SNP p-values,
the gene set(s) of interest, and a correlation matrix (if
desired). One method (GLOSSI) requires independent SNPs and the
other (VEGAS) can take into account correlation (LD) among the
SNPs. Built-in plotting functions are available to help users
visualize results.

Caitlin McHugh

cpvSNP

Gene set analysis methods for SNP association p-values that lie
in genes in given gene sets

summary-methods function

<dl>
 Defined methods include:
	<dt>
		<code>signature(x = "VEGASResult")</code>,
		<code>signature(x = "GLOSSIResult")</code>
		</dt><dd>
			These methods display the corresponding statistics and p-values for the corresponding VEGAS or GLOSSI analysis.
		</dd> </dl> 

Methods


 ~~ Methods for function <code>show</code> in package <span class = "pkg">base</span> ~~


summary-methods: Methods for Function `show` in Package base

Description

Arguments

Methods