cpvSNP (version 1.4.0)

statistic-methods: ~~ Methods for Function statistic ~~

Description

This function returns the calculated statistic for a specified GeneSet or a list of calculated statistics for a GeneSetCollection.

Usage

statistic(object)

Arguments

object

An object of type GeneSetResult, VEGASResult, GLOSSIResult, GeneSetResultCollection, VEGASResultCollection or GLOSSIResultCollection

Methods

Defined methods include:

signature(object = "GeneSetResult")

Returns the calculated statistic for a specified GeneSetResult object

signature(object = "GeneSetResultCollection")

Returns a list of calculated statistics for a GeneSetResultCollection object (1 for each set)

signature(object = "VEGASResult")

Returns the calculated statistic for a specified VEGASResult object

signature(object = "VEGASResultCollection")

Returns a list of calculated statistics for a VEGASResultCollection object (1 for each set)

signature(object = "GLOSSIResult")

Returns the calculated statistic for a specified GLOSSIResult object

signature(object = "GLOSSIResultCollection")

Returns a list of calculated statistics for a GLOSSIResultCollection object (1 for each set)

Value

Returns decimal values or a list of decimal values corresponding to calculated statistics from a GLOSSI function call.

See Also

GLOSSIResult-class, pValue

Examples

	## Not run: 
# 	statistic( glossi(geneSet, assoc_table, ldMatrix) ) 
# 	## End(Not run)