Arguments
pvals
A vector of p-values corresponding to items in
the set.
ld_matrix
A square, symmetric matrix of LD values, with
each row and column corresponding to each of the items in the
set. The diagonal entries should be 1, indicating the LD
between an item in the set and itself is 1.
num_sims
An integer value for the number of simulations
to be performed.
correction
A logical argument indicating whether a
value of one should be added to the numerator when calculating
the p-value based upon the simulated statistics. By default,
the correction is added. An argument of FALSE will not add one
to the numerator.
seed
An integer argument indicating what the random
seed should be set to. This allows for replication of results.
The default is NULL, and a random seed will be set internally.
verbose
A logical argument indicating whether periodic
output should be printed. Defaults to FALSE, indicating no
output will be printed.