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crmn (version 0.0.8)

CCMN and other noRMalizatioN methods for metabolomics data

Description

Implements the Cross-contribution Compensating Multiple standard Normalization (CCMN) method and other normalization algorithms.

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Version

Install

install.packages('crmn')

Monthly Downloads

953

Version

0.0.8

License

GPL (>= 3)

Maintainer

Henning Redestig

Last Published

December 2nd, 2009

Functions in crmn (0.0.8)

plot.nFit

Plot nfit...
analytes_eset

Accessor for the analytes...
show_nfit

Show nfit...
model

Accessor for the model...
analytes_other

Accessor for the analytes...
analytes

Accessor for the analytes...
normalize

Normalize...
show

Show...
sFit

Accessor for the standards model...
standards_other

Accessor for the Internal Standards...
pcaMuffle

Muffle...
weightnorm

weigthnorm...
method

Accessor for the method...
makeX

Make X...
standards_eset

Accessor for the Internal Standards...
mexprs_bla

Matrix safe setter of expression slot...
mexprs

Matrix safe accessor of expression slot...
standards

Accessor for the Internal Standards...
dropunusedlevels

Drop unused levels...
set_mexprs

Matrix safe setter of expression slot...
nFit

Normalization model...
crmn

CRMN
mix

Dilution mixture dataset.
makeX_eset

Make X...
standardsFit

Standards model...
standardsPred

Standards model...
normPred

Predict for normalization...
normFit

Fit a normalization model...
makeX_other

Make X...