add_value

Attach a generic user-provided value to graph

Provides a general toolkit for drug target identification. We include functionality to reduce large graphs to subgraphs and prioritize nodes. In addition to being optimized for use with generic graphs, we also provides support to analyze protein-protein interactions networks from online repositories. For more details on core method, refer to Weaver et al. (2021) <https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008755>.

Davis Weaver

crosstalkr

Analysis of Graph-Structured Data with a Focus on
Protein-Protein Interaction Networks

add_value function

<dl><dt>val</dt>
<dd>named numeric vector where the names correspond to vertices in g</dd>
<dt>g</dt>
<dd>igraph object - will be filtered so that only nodes found in both exp and g are kept</dd>
<dt>val_name</dt>
<dd>str key for val</dd></dl>

Arguments

Attach a generic user-provided value to graph — add_value

<dl>

<dt>val</dt>
<dd>named numeric vector where the names correspond to vertices in g</dd>


<dt>g</dt>
<dd>igraph object - will be filtered so that only nodes found in both exp and g are kept</dd>


<dt>val_name</dt>
<dd>str key for val</dd>

</dl>

add_value: Attach a generic user-provided value to graph

Description

Usage

Value

Arguments