dist_calc

This function is called by the high-level function "bootstrap_null".
Not expected to be used by end-users - we only export it so that environments
inside foreach loops can find it.

Provides a general toolkit for drug target identification. We include functionality to reduce large graphs to subgraphs and prioritize nodes. In addition to being optimized for use with generic graphs, we also provides support to analyze protein-protein interactions networks from online repositories. For more details on core method, refer to Weaver et al. (2021) <https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008755>.

Davis Weaver

crosstalkr

Analysis of Graph-Structured Data with a Focus on
Protein-Protein Interaction Networks

dist_calc function

<dl><dt>df</dt>
<dd>: numeric vector</dd>
<dt>seed_proteins</dt>
<dd>user defined seed proteins</dd></dl>

Arguments

Internal function that computes the mean/stdev for each gene from a wide-format data frame. — dist_calc

<dl>

<dt>df</dt>
<dd>: numeric vector</dd>


<dt>seed_proteins</dt>
<dd>user defined seed proteins</dd>

</dl>

dist_calc: Internal function that computes the mean/stdev for each gene from a wide-format data frame.

Description

Usage

Value

Arguments