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ctmm (version 0.3.1)

Continuous-Time Movement Modeling

Description

Functions for identifying, fitting, and applying continuous-space, continuous-time stochastic movement models to animal tracking data.

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Version

Install

install.packages('ctmm')

Monthly Downloads

1,955

Version

0.3.1

License

GPL-3

Maintainer

C H Fleming

Last Published

February 24th, 2016

Functions in ctmm (0.3.1)

buffalo

African buffalo GPS dataset from Kruger National Park, South Africa.
ctmm.loglike

Calculate the log-likelihood of a continuous-time movement model
akde.bandwidth

Calculate the optimal bandwidth matrix of movement data
periodogram

Calculate the Lomb-Scargle periodogram of animal-tracking data
ctmm

Specify, fit, and select continuous-time movement models
summary.ctmm

Summarize a continuous-time movement model
as.telemetry

Import, coerce, and summarize MoveBank data
homerange

Calculate a range distribution estimate
akde

Calculate an autocorrelated kernel density estimate
plot.telemetry

Plotting methods for telemetry objects.
ctmm-package

Continuous-time movement modeling
summary.UD

Summarize a range distribution
export

Export ctmm data formats
mean.variogram

Compute a number-weighted average of variogram objects
ctmm::zoom

Plot with zoom slider
variogram

Calculate an empirical variogram from movement data
plot.variogram

Plotting methods for variogram objects.
variogram.fit

Visually fit a movement model to a variogram
gazelle

Mongolian gazelle GPS dataset from the Mongolia's Eastern Steppe.
simulate.ctmm

Simulate a continuous-time movement model
occurrence

Calculate a Kriged occurrence disribution estimate