cuperdec (version 1.1.0)

load_taxa_table: Load OTU table

Description

Loads a typical taxa table (Samples: columns; Taxa: rows) in TSV format and standardises some columns, storing the table in the form of a tibble.

Usage

load_taxa_table(x)

Arguments

x

Path to a TSV file or tidy dataframe (e.g. tibble) consisting of an OTU table of samples as columns, except first column with taxon names.

Value

A tibble, formatted for use in downstream cuperdec functions.

Examples

# NOT RUN {
data(cuperdec_taxatable_ex)
taxa_table <- load_taxa_table(cuperdec_taxatable_ex)
# }