quasiSteadyStates

Either name of the csv-file or the eqnlist of the model. If NULL, specify smatrix, states and rates by hand.

model

Character vector, list of flux parameters corresponding to the fast fluxes used for quasi steady-state approximation. 
The ratio between participating fluxes is introduced as a new free parameter.

fastreact

Character, name of state that is expressed by the other states during the simplification

state2Remove

Numeric matrix, stiochiometry matrix of the system

smatrix

Character vector, state vector of the system

states

Character vector, flux vector of the system

rates

Define the output format. By default "R" generating dMod 
compatible output. To obtain an output appropriate for d2d [1] "M" must be 
selected (Not yet provided).

outputFormat

Reduce the ODE system by means of a quasi steady-state assumption

The framework provides functions to generate ODEs of reaction
networks, parameter transformations, observation functions, residual functions,
etc. The framework follows the paradigm that derivative information should be
used for optimization whenever possible. Therefore, all major functions produce
and can handle expressions for symbolic derivatives.

quasiSteadyStates: Reduce the ODE system by means of a quasi steady-state assumption

Description

Usage

Arguments

Value

References