damr v0.3.1

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Interface to Drosophila Activity Monitor System Result Files

Loads behavioural data from the widely used Drosophila Activity Monitor System (DAMS, TriKinetics) into the rethomics framework.

Readme

damrTravis-CI Build StatusCoverage StatusCRANCRAN log

damr is part of the rethomics framework. This README is a short explanation of the basics of damr. A comprehensive tutorial is available on the rethomics webpage. We also provide a conventional pdf documentation.

Installation

library(devtools)
install_github("rethomics/damr")

Functions in damr

Name Description
damr_example Get path to damr example
link_dam_metadata Link DAM2 or DAM5 metadata to result files
load_dam Load DAMS data from one or several continuous text files
read_dam_file Reads data from a single DAM2 single beam or a DAM5 multibeam file
single_file_metadata A simple toy metadata defining the experimental conditions of 32 animals monitored at the same time in a single DAM2 monitor. Each animal has its own channel (region_id), as well as a condition and genotype. It serves as an example for link_dam_metadata.
two_files_metadata A toy metadata defining the experimental conditions of 64 animals monitored at the same time in two separate DAM2 monitors. Each animal has its own channel (region_id), as well as a condition and genotype. It serves as an example for link_dam_metadata.
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Details

Date 2018-05-03
License GPL-3
Encoding UTF-8
LazyData true
URL https://github.com/rethomics/damr
BugReports https://github.com/rethomics/damr/issues
RoxygenNote 6.0.1
NeedsCompilation no
Packaged 2018-05-14 15:00:50 UTC; quentin
Repository CRAN
Date/Publication 2018-05-15 16:01:13 UTC

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