dartR (version 1.1.11)

platy: Example data set as text file to be imported into a genlight object

Description

Check ?read.genetable in pacakge PopGenReport for details on the format.

Format

csv

Examples

# NOT RUN {
library(PopGenReport)
read.csv( paste(.libPaths()[1],"/dartR/extdata/platy.csv",sep="" ))
platy <- read.genetable( paste(.libPaths()[1],"/dartR/extdata/platy.csv",
sep="" ), ind=1, pop=2, lat=3, long=4, other.min=5, other.max=6, oneColPerAll=FALSE,
sep="/")
platy.gl <- (gi2gl(platy))
df.loc <- data.frame(RepAvg = runif(nLoc(platy.gl)), CallRate = 1)
platy.gl@other$loc.metrics <- df.loc
gl.report.repavg(platy.gl)
# }