dartR (version 1.9.9.1)

gl.plot.heatmap: Represent a distance matrix as a heatmap

Description

The script plots a heat map to represent the distances in the distance or dissimilarity matrix

Usage

gl.plot.heatmap(D, verbose = NULL)

Arguments

D

-- name of the distance matrix or class fd object [required]

verbose

-- verbosity: 0, silent or fatal errors; 1, begin and end; 2, progress log ; 3, progress and results summary; 5, full report [default 2]

Examples

# NOT RUN {
   gl <- testset.gl[1:10,]
   D <- dist(as.matrix(gl),upper=TRUE,diag=TRUE)
   gl.plot.heatmap(D)
   D2 <- gl.dist.pop(testset.gl)
   gl.plot.heatmap(D2)
   D3 <- gl.fixed.diff(testset.gl)
   gl.plot.heatmap(D3)
# }