Recodes in the quite specific faststructure format (e.g first six columns need to be there, but are ignored...check faststructure documentation (if you find any :-( )))
gl2faststructure(
x,
outfile = "gl.str",
outpath = tempdir(),
probar = FALSE,
verbose = NULL
)-- name of the genlight object containing the SNP data [required]
-- file name of the output file (including extension) [default gl.str]
-- path where to save the output file [default tempdir(), mandated by CRAN]. Use outpath=getwd() or outpath="." when calling this function to direct output files to your working directory.
switch to show/hide progress bar
-- verbosity: 0, silent or fatal errors; 1, begin and end; 2, progress log ; 3, progress and results summary; 5, full report [default 2 or as specified using gl.set.verbosity]
The script writes out the a file in faststructure format.