dbparser (version 1.0.3)

parse_drug_targets_links: Extracts the drug targets links element and return data as data frame.

Description

parse_drug_targets_links returns data frame of drug targets links elements.

Usage

parse_drug_targets_links(save_table = FALSE, save_csv = FALSE,
  csv_path = ".", override_csv = FALSE)

Arguments

save_table

boolean, save table in database if true.

save_csv

boolean, save csv version of parsed dataframe if true

csv_path

location to save csv files into it, default is current location, save_csv must be true

override_csv

override existing csv, if any, in case it is true in the new parse operation

Value

drug targets_links node attributes date frame

Details

This functions extracts the targets links element of drug node in drug bank xml database with the option to save it in a predefined database via open_db method. It takes one single optional argument to save the returned dataframe in the database. It must be called after get_xml_db_rows function like any other parser function. If get_xml_db_rows is called before for any reason, so no need to call it again before calling this function.

Examples

# NOT RUN {
# return only the parsed dataframe
parse_drug_targets_links()

# save in database and return parsed dataframe
parse_drug_targets_links(save_table = TRUE)

# save parsed dataframe as csv if it does not exist in current
# location and return parsed dataframe.
# If the csv exist before read it and return its data.
parse_drug_targets_links(save_csv = TRUE)

# save in database, save parsed dataframe as csv if it does not
# exist in current location and return parsed dataframe.
# If the csv exist before read it and return its data.
parse_drug_targets_links(ssave_table = TRUE, save_csv = TRUE)

# save parsed dataframe as csv if it does not exist in given
# location and return parsed dataframe.
# If the csv exist before read it and return its data.
parse_drug_targets_links(save_csv = TRUE, csv_path = TRUE)

# save parsed dataframe as csv if it does not exist in
#  current location and return parsed dataframe.
# If the csv exist override it and return it.
parse_drug_targets_links(save_csv = TRUE, csv_path = TRUE, override = TRUE)
# }

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