mapEnrichmentToColorsDual

the palette to use for enrichment (by default Orange-Red)

palette.pos

the palette to use for depletion (by default Purple-Blue)

palette.neg

the colour to use for class labels, if applicable (by default light green)

class.col

by how much to scale the -log10(p.value) when color coding

scale

Map enrichment values into two different palettes for enriched/depleted variables

Distinguish direct from indirect interactions in gene
regulation and infer combinatorial code from highly correlated
variables such as transcription factor binding profiles. The
package implements the Neighbourhood Consistent PC algorithm
(NCPC) and draws Direct Dependence Graphs to represent
dependence structure around a target variable. The package also
provides a unified interface to other Graphical Modelling
(Bayesian Network) packages for distinguishing direct and
indirect interactions.

mapEnrichmentToColorsDual: Map enrichment values into two different palettes for enriched/depleted variables...

Description

Usage

Arguments

Value