ddpcr (version 1.11)

remove_empty: Analysis step: Remove empty droplets

Description

Find the empty droplets (double-negative droplets) in each well in a plate and assign these droplets to the EMPTY cluster. See the README for more information about the algorithm used to find empty droplets.

Usage

remove_empty(plate)

Arguments

plate

A ddPCR plate.

Value

A ddPCR plate with the empty droplets marked as empty. The plate's metadata will have a few new variables relating to the empty droplets.

Details

This function is recommended to be run as part of an analysis pipeline (ie. within the analyze function) rather than being called directly.

See Also

analyze get_empty_cutoff