classify_droplets

The main analysis step for ddPCR plates of type <code>pnpp_experiment</code>.
Classify each droplet as either rain, ++, or +-. Also calculate the frequency
of negative droplets, and attempt to detemine if each well has a statistically
significant number of such droplets. 
<a href="https://github.com/daattali/ddpcr#advanced-topic-2-algorithms-used-in-each-step">See the README</a> for
more information about the algorithm used.

internal

An interface to explore, analyze, and visualize droplet digital PCR
(ddPCR) data in R. This is the first non-proprietary software for analyzing
two-channel ddPCR data. An interactive tool was also created and is available
online to facilitate this analysis for anyone who is not comfortable with
using R.

Dean Attali

ddpcr

Analysis and Visualization of Droplet Digital PCR in R and on
the Web

classify_droplets function

<dl><dt>plate</dt>
<dd>A ddPCR plate.</dd></dl>

Arguments

The main analysis step for ddPCR plates of type <code>pnpp_experiment</code>.
Classify each droplet as either rain, ++, or +-. Also calculate the frequency
of negative droplets, and attempt to detemine if each well has a statistically
significant number of such droplets. 
<a href='https://github.com/daattali/ddpcr#advanced-topic-2-algorithms-used-in-each-step'>See the README</a> for
more information about the algorithm used.

Analysis step: Classify droplets — classify_droplets

<dl>

<dt>plate</dt>
<dd>A ddPCR plate.</dd>

</dl>

classify_droplets: Analysis step: Classify droplets

Description

Usage

Value

Arguments

Details

See Also