Output the denoised sequence to a fastq format with placeholder phred scores.
write_fastq(x, ...)# S3 method for DNAseq
write_fastq(x, ..., outfile = "denoised.fastq",
append = TRUE, keep_phred = TRUE, phred_placeholder = "#")
a DNAseq class object.
additional arguments to be passed between methods.
The name of the file to output the data to. Default is "denoised.fasta".
Should the ccs consensus sequence be appended to the output file?(TRUE) Or overwrite the file?(FALSE) Default is TRUE.
Should the original PHRED scores be kept in the output? Default is TRUE.
The character to input for the phred score line. Default is '#'.
a class object of code"DNAseq"