debrowser (version 1.0.8)

run_pca: run_pca

Description

Runs PCA on the selected dataset.

Usage

run_pca(x = NULL, retx = TRUE, center = TRUE, scale = TRUE)

Arguments

x,

dataframe with experiment data

retx,

specifies if the data should be returned

center,

center the PCA (Boolean)

scale,

scale the PCA (Boolean)

Value

pca list

Examples

    load(system.file("extdata", "demo", "demodata.Rda", 
        package="debrowser"))
    pca_data<-run_pca(getNormalizedMatrix(
        demodata[rowSums(demodata[,2:7])>10,2:7]))