getBestAssociatedGeneSet: Get best associated functional gene sets for partitions of gene i
Description
Get best associated functional gene sets for partitions of gene i
Usage
getBestAssociatedGeneSet(pathway, all8Partitions, onePartition, MaxGene, minSupport)
Arguments
pathway
All functional gene sets
all8Partitions
All eight possible partitions for gene i
onePartition
The partition to be associated with the functional gene set
MaxGene
Number of genes in expression data
minSupport
Minimum support for functional gene set
Value
The adjusted p-values for the best associated gene set of the input partition