deconstructSigs

deconstructSigs-package


Takes sample information in the form of the fraction of mutations
in each of 96 trinucleotide contexts and identifies the weighted combination 
of published signatures that, when summed, most closely reconstructs the 
mutational profile.


Takes sample information in the form of the fraction of mutations
in each of 96 trinucleotide contexts and identifies the weighted combination
of published signatures that, when summed, most closely reconstructs the
mutational profile.

Rachel Rosenthal

Identifies Signatures Present in a Tumor Sample

deconstructSigs function

 <ul>
<li> <code><a rd-options="" href="/link/whichSignatures?package=deconstructSigs&version=1.8.0" data-mini-rdoc="deconstructSigs::whichSignatures">whichSignatures</a></code> 
  </li>
<li> <code><a rd-options="" href="/link/mut.to.sigs.input?package=deconstructSigs&version=1.8.0" data-mini-rdoc="deconstructSigs::mut.to.sigs.input">mut.to.sigs.input</a></code> 
  </li>
<li> <code><a rd-options="" href="/link/plotSignatures?package=deconstructSigs&version=1.8.0" data-mini-rdoc="deconstructSigs::plotSignatures">plotSignatures</a></code> 
  </li>
<li> <code><a rd-options="" href="/link/makePie?package=deconstructSigs&version=1.8.0" data-mini-rdoc="deconstructSigs::makePie">makePie</a></code>
  </li>
</ul> 

deconstructSigs: deconstructSigs

Description

Arguments

Main functions