sample.mut.ref


A data frame containing example mutations that can be used as input to 
mut.to.sigs.input(). Data comes from two TCGA LUAD patients 
(http://cancergenome.nih.gov/) Contains the following columns:


datasets

Takes sample information in the form of the fraction of mutations
in each of 96 trinucleotide contexts and identifies the weighted combination
of published signatures that, when summed, most closely reconstructs the
mutational profile.

Rachel Rosenthal

deconstructSigs

Identifies Signatures Present in a Tumor Sample

sample.mut.ref function

A data frame of 657 rows and 5 column that contains example mutations 
 which could be used in mut.to.sigs.input()

Format

<a href="http://cancergenome.nih.gov/">http://cancergenome.nih.gov/</a>

Source

<a href = 'http://cancergenome.nih.gov/'>http://cancergenome.nih.gov/</a>

sample.mut.ref: Example input to mut.to.sigs.input()

Description

Arguments

Format

Source

Details