signatures.nature2013


A dataset containing the published signatures from Alexandrov et al read into
R as a data frame. Can be used the 'signatures.ref' parameter in
whichSignatures(). Data obtained: Nature 2013 PMID:23945592


datasets

Takes sample information in the form of the fraction of mutations
in each of 96 trinucleotide contexts and identifies the weighted combination
of published signatures that, when summed, most closely reconstructs the
mutational profile.

Rachel Rosenthal

deconstructSigs

Identifies Signatures Present in a Tumor Sample

signatures.nature2013 function

Format

<a href="http://www.ncbi.nlm.nih.gov/pubmed/23945592">http://www.ncbi.nlm.nih.gov/pubmed/23945592</a>

Source

<a href = 'http://www.ncbi.nlm.nih.gov/pubmed/23945592'>http://www.ncbi.nlm.nih.gov/pubmed/23945592</a>

signatures.nature2013: Published Signatures from Alexandrov et al 2013

Description

Arguments

Format

Source