est_ptr_on_all

Estimates PTRs based on the whole input dataset

Multi-sample algorithm based on contigs and coverage values, to
infer the relative distances of contigs from the replication origin and to
accurately compare bacterial growth rates between samples. Yuan Gao and
Hongzhe Li (2018) <doi:10.1038/s41592-018-0182-0>.

Charlie Bushman

demic

Dynamic Estimator of Microbial Communities

Yuan Gao

est_ptr_on_all function

<dl><dt>X</dt>
<dd>cov3 dataframe</dd></dl>

Arguments

Estimates PTRs based on the whole input dataset — est_ptr_on_all

<dl>

<dt>X</dt>
<dd>cov3 dataframe</dd>

</dl>

est_ptr_on_all: Estimates PTRs based on the whole input dataset

Description

Usage

Value

Arguments

Examples