est_ptrs_subset

Get PTR estimates for output of the core pipeline on a subset of data

Multi-sample algorithm based on contigs and coverage values, to
infer the relative distances of contigs from the replication origin and to
accurately compare bacterial growth rates between samples. Yuan Gao and
Hongzhe Li (2018) <doi:10.1038/s41592-018-0182-0>.

Charlie Bushman

demic

Dynamic Estimator of Microbial Communities

Yuan Gao

est_ptrs_subset function

<dl><dt>p</dt>
<dd>is the pipeline named list</dd></dl>

Arguments

Get PTR estimates for output of the core pipeline on a subset of data — est_ptrs_subset

<dl>

<dt>p</dt>
<dd>is the pipeline named list</dd>

</dl>

est_ptrs_subset: Get PTR estimates for output of the core pipeline on a subset of data

Description

Usage

Value

Arguments