get_eptr_stats

Generate a variety of stats on PTR estimates for a given dataset

Multi-sample algorithm based on contigs and coverage values, to
infer the relative distances of contigs from the replication origin and to
accurately compare bacterial growth rates between samples. Yuan Gao and
Hongzhe Li (2018) <doi:10.1038/s41592-018-0182-0>.

Charlie Bushman

demic

Dynamic Estimator of Microbial Communities

Yuan Gao

get_eptr_stats function

<dl><dt>X</dt>
<dd>cov3 dataframe</dd>
<dt>iterations</dt>
<dd>number of iterations to run</dd></dl>

Arguments

Generate a variety of stats on PTR estimates for a given dataset — get_eptr_stats

<dl>

<dt>X</dt>
<dd>cov3 dataframe</dd>


<dt>iterations</dt>
<dd>number of iterations to run</dd>

</dl>

get_eptr_stats: Generate a variety of stats on PTR estimates for a given dataset

Description

Usage

Value

Arguments

Examples