dendextend (version 1.1.2)

as.phylo.dendrogram: Convert a dendrogram into phylo

Description

Based on as.hclust.dendrogram with as.phylo.hclust In the future I hope a more direct link will be made.

Usage

as.phylo.dendrogram(x, ...)

Arguments

x

a dendrogram

...

ignored.

Value

• A phylo class object

See Also

as.dendrogram, as.hclust, as.phylo

Examples

library(dendextend)
library(ape)
dend <- iris[1:30,-5] %>% dist %>% hclust %>% as.dendrogram
dend2 <- as.phylo(dend)
plot(dend2, type = "fan")


# Also possible to with ggplot2 :)

library(dendextend)
library(ggplot2)
library(ggdendro)
dend <- iris[1:30,-5] %>% dist %>% hclust %>% as.dendrogram
# Rectangular lines
ddata <- dend %>% dendro_data(type = "rectangle")
p <- ggplot(segment(ddata)) +
   geom_segment(aes(x = x, y = y, xend = xend, yend = yend)) +
   coord_flip() +
   scale_y_reverse(expand = c(0.2, 0)) + coord_polar(theta="x")
p