denim (version 1.2.1)

denim_dsl: Define transitions using denim's domain-specific language (DSL)

Description

This function parses model transitions defined in denim's DSL syntax

Usage

denim_dsl(x)

Value

denim_transition object

Arguments

x

• an expression written in denim's DSL syntax. Each line should be a transition written in the format compartment -> out_compartment = expression where expression can be either a math expression or one of denim's built-in dwell time distribution function

Examples

transitions <- denim_dsl({
  S -> I = beta * (I/N) * S * timeStep
  I -> R = d_gamma(rate = 1/4, shape = 3)
})