derfinder-deprecated: Deprecated functions in package ‘derfinder’
Description
These functions are provided for compatibility with older versions
of ‘derfinder’ only, and will be defunct at the next release.
Usage
advanced_arg()
analyze_chr()
annotate_regions()
calculate_pvalues()
calculate_stats()
coerce_gr()
collapse_full_coverage()
coverage_to_exon()
create_bw()
create_bw_sample()
extended_map_seqlevels()
filter_data()
find_regions()
full_coverage()
get_region_coverage()
load_coverage()
make_genomic_state()
make_models()
merge_results()
preprocess_coverage()
raw_files()
region_matrix()
sample_depth()
Details
The following functions are deprecated and will be made defunct; use
the replacement indicated below: