{"Package":"derfinderPlot","Type":"Package","Title":"Plotting functions for derfinder","Version":"1.2.0","Date":"2015-03-13","Authors@R":"c(person(\"Leonardo\", \"Collado-Torres\", role = c(\"aut\", \"cre\"), email\n= \"lcollado@jhu.edu\"), person(c(\"Andrew\", \"E.\"), \"Jaffe\", role = \"aut\",\nemail = \"andrew.jaffe@libd.org\"), person(c(\"Jeffrey\", \"T.\"), \"Leek\",\nrole = c(\"aut\", \"ths\"), email = \"jtleek@gmail.com\"))","Depends":"\nR(>= 3.2)","Imports":"\nderfinder (>= 1.1.0),\nGenomeInfoDb (>= 1.3.3),\nGenomicFeatures,\nGenomicRanges (>= 1.17.40),\nggbio (>= 1.13.13),\nggplot2,\nIRanges (>= 1.99.28),\nplyr,\nRColorBrewer,\nreshape2,\nscales","Suggests":"\nbiovizBase,\nbumphunter (>= 1.7.6),\nderfinderData (>= 0.99.0),\ndevtools (>= 1.6),\nknitcitations (>= 1.0.1),\nknitr (>= 1.6),\nknitrBootstrap (>= 0.9.0),\norg.Hs.eg.db,\nrmarkdown (>= 0.3.3),\ntestthat,\nTxDb.Hsapiens.UCSC.hg19.knownGene","VignetteBuilder":"knitr","Description":"Plotting functions for derfinder","License":"Artistic-2.0","LazyData":"false","URL":"https://github.com/lcolladotor/derfinderPlot","BugReports":"https://github.com/lcolladotor/derfinderPlot/issues","biocViews":"DifferentialExpression, Sequencing, RNASeq, Software, Visualization","readme":"derfinderPlot [![Build Status](https://travis-ci.org/leekgroup/derfinderPlot.png?branch=master)](https://travis-ci.org/leekgroup/derfinderPlot) $\"build$ $\"Whether$ $\"How$ $\"Percentile$ $\"Support$ $\"average$ \n=============\n\nAddon package with plotting functions for\n[derfinder](http://www.bioconductor.org/packages/derfinder) results.\n\n# Installation instructions\n\nGet R 3.2.0 from [CRAN](http://cran.r-project.org/).\n\n```R\n## From Bioconductor\nsource('http://bioconductor.org/biocLite.R')\nbiocLite('derfinderPlot')\n```\n\n# Vignette\n\nThe vignette for this package can be viewed [here](http://leekgroup.github.io/derfinderPlot/) or via [Bioconductor's website](http://www.bioconductor.org/packages/derfinderPlot).\n\n# Citation\n\nUse [derfinder's citation](https://github.com/lcolladotor/derfinder#citation) information.\n\n\n# Testing\n\nTesting on Bioc-devel is feasible thanks to [r-builder](https://github.com/metacran/r-builder) as well as Bioconductor's nightly build.","repoType":"bioconductor"}

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