pairLevel: Pair levels for paired RILs (or strains)
Description
Pair levels for two RILs (or strains) allocated into one slide (bTwoColorArray=TRUE). It
is a subfunction needed for designScore function, but is not directly
used.
Usage
pairLevel( xxx, rilNames )
Arguments
xxx
can be genotype.level, condition.level or interaction.level
rilNames
names for all RILs (or strains) that have been selected for the experiment
Value
Pair levels for two RILs (or strains) allocated into one slide.
Details
This function is used only for two-color array.
References
Y. Li, R. Breitling and R.C. Jansen. Generalizing genetical
genomics: the added value from environmental perturbation, Trends Genet
(2008) 24:518-524.
Y. Li, M. Swertz, G. Vera, J. Fu, R. Breitling, and R.C. Jansen. designGG:
An R-package and Web tool for the optimal design of genetical genomics
experiments. BMC Bioinformatics 10:188(2009)
http://gbic.biol.rug.nl/designGG