dgpsi (version 2.6.0)

plot: Validation plots of a constructed GP, DGP, or linked (D)GP emulator

Description

This function draws validation plots of a GP, DGP, or linked (D)GP emulator.

Usage

# S3 method for dgp
plot(
  x,
  x_test = NULL,
  y_test = NULL,
  dim = NULL,
  method = "mean_var",
  sample_size = 50,
  style = 1,
  min_max = TRUE,
  normalize = TRUE,
  color = "turbo",
  type = "points",
  verb = TRUE,
  M = 50,
  force = FALSE,
  cores = 1,
  ...
)
# S3 method for lgp
plot(
  x,
  x_test = NULL,
  y_test = NULL,
  dim = NULL,
  method = "mean_var",
  sample_size = 50,
  style = 1,
  min_max = TRUE,
  color = "turbo",
  type = "points",
  M = 50,
  verb = TRUE,
  force = FALSE,
  cores = 1,
  ...
)
# S3 method for gp
plot(
  x,
  x_test = NULL,
  y_test = NULL,
  dim = NULL,
  method = "mean_var",
  sample_size = 50,
  style = 1,
  min_max = TRUE,
  color = "turbo",
  type = "points",
  verb = TRUE,
  M = 50,
  force = FALSE,
  cores = 1,
  ...
)

Value

A patchwork object.

Arguments

x

can be one of the following emulator classes:

• the S3 class gp.

• the S3 class dgp.

• the S3 class lgp.

x_test

same as that of validate().

y_test

same as that of validate().

dim

if dim = NULL, the index of an emulator's input within the design will be shown on the x-axis in validation plots. Otherwise, dim indicates which dimension of an emulator's input will be shown on the x-axis in validation plots:

• If x is an instance of the gp of dgp class, dim is an integer.

• If x is an instance of the lgp class, dim is an integer referring to the dimension of the global input to the linked emulator system.

This argument is only used when style = 1. Defaults to NULL.

method

same as that of validate().

sample_size

same as that of validate().

style

either 1 or 2, indicating two different plotting styles for validation.

min_max

a bool indicating if min-max normalization will be used to scale the testing output, RMSE, predictive mean and std from the emulator. Defaults to TRUE. This argument is not applicable to DGP emulators with categorical likelihoods.

normalize

a bool indicating if normalization will be used to scale the counts in validation plots of DGP emulators with categorical likelihoods when style = 2. Defaults to TRUE.

color

a character string indicating the color map to use when style = 2:

• 'magma' (or 'A')

• 'inferno' (or 'B')

• 'plasma' (or 'C')

• 'viridis' (or 'D')

• 'cividis' (or 'E')

• 'rocket' (or 'F')

• 'mako' (or 'G')

• 'turbo' (or 'H')

Defaults to 'turbo' (or 'H').

type

either 'line' or 'points, indicating whether to draw testing data in the OOS validation plot as a line or individual points when the input of the emulator is one-dimensional and style = 1. This argument is not applicable to DGP emulators with categorical likelihoods. Defaults to 'points'

verb

a bool indicating if trace information on plotting will be printed during execution. Defaults to TRUE.

M

same as that of validate().

force

same as that of validate().

cores

same as that of validate().

...

N/A.

Details

See further examples and tutorials at https://mingdeyu.github.io/dgpsi-R/.

Examples

if (FALSE) {

# See gp(), dgp(), or lgp() for an example.
}