mb_small

<p>A dataset containing a subset of the publicly available 
10X single-nucleus RNA-seq data set of freshly dissected 
mouse brain tissue.</p>

datasets

Identification of debris-containing droplets
from a droplet-based single cell/nucleus RNA-seq. 'diem' uses
the expression profile of background RNA droplets, followed
by expectation maximization (EM), to assign candidates as
debris or nuclei. See Alvarez M, Rahmani E, et al (2019)
<doi:10.1101/786285> for details.

Marcus Alvarez

diem

Debris-Containing Droplet Identification using EM

Elior Rahmani

mb_small function

<p>An SCE object with 1,001 rows (genes) and 2,451 droplets (columns)</p>

mb_small: Single-nucleus RNA-seq of mouse brain

Description

Usage

Arguments

Format