listToDDLS

Transform DigitalDLSorter-like list into an actual <code>DigitalDLSorter</code>
object. This function allows to generate the examples and the vignettes of
digitalDLSorteR package as these are the data used. These data are
stored in the digitalDLSorteRdata package.

Deconvolution of bulk RNA-Seq data using context-specific deconvolution models based on Deep Neural Networks using scRNA-Seq data as input. These models are able to make accurate estimates of the cell composition of bulk RNA-Seq samples from the same context using the advances provided by Deep Learning and the meaningful information provided by scRNA-Seq data. See Torroja and Sanchez-Cabo (2019) <doi:10.3389/fgene.2019.00978> for more details.

Diego Ma<c3><b1>anes

digitalDLSorteR

Deconvolution of Bulk RNA-Seq Data Based on Deep Learning

Diego Mañanes

Carlos Torroja

Fatima Sanchez-Cabo

listToDDLS function

<dl><dt>listTo</dt>
<dd>A list in which each element must correspond to each slot of an
<code>DigitalDLSorter</code> object. The names must be the same as the slot
names.</dd></dl>

Arguments

Transform DigitalDLSorter-like list into an actual DigitalDLSorterDNN object — listToDDLS

<dl>

<dt>listTo</dt>
<dd>A list in which each element must correspond to each slot of an
<code>DigitalDLSorter</code> object. The names must be the same as the slot
names.</dd>

</dl>

listToDDLS: Transform DigitalDLSorter-like list into an actual DigitalDLSorterDNN object

Description

Usage

Value

Arguments

See Also