listToDDLSDNN

Transform DigitalDLSorterDNN-like list into an actual
<code>DigitalDLSorterDNN</code> object. This function allows to use pre-trained
models in the digitalDLSorteR package. These models are stored in the
digitalDLSorteRmodels package.

Deconvolution of bulk RNA-Seq data using context-specific deconvolution models based on Deep Neural Networks using scRNA-Seq data as input. These models are able to make accurate estimates of the cell composition of bulk RNA-Seq samples from the same context using the advances provided by Deep Learning and the meaningful information provided by scRNA-Seq data. See Torroja and Sanchez-Cabo (2019) <doi:10.3389/fgene.2019.00978> for more details.

Diego Ma<c3><b1>anes

digitalDLSorteR

Deconvolution of Bulk RNA-Seq Data Based on Deep Learning

Diego Mañanes

Carlos Torroja

Fatima Sanchez-Cabo

listToDDLSDNN function

<dl><dt>listTo</dt>
<dd>A list in which each element must correspond to each slot of an
<code>DigitalDLSorterDNN</code> object. The names must be the same as the slot
names.</dd></dl>

Arguments

Transform DigitalDLSorterDNN-like list into an actual DigitalDLSorterDNN
object — listToDDLSDNN

<dl>

<dt>listTo</dt>
<dd>A list in which each element must correspond to each slot of an
<code>DigitalDLSorterDNN</code> object. The names must be the same as the slot
names.</dd>

</dl>

listToDDLSDNN: Transform DigitalDLSorterDNN-like list into an actual DigitalDLSorterDNN object

Description

Usage

Value

Arguments

See Also