recodeBinary

In tumor tissue, underlying genomic instability can lead to DNA copy number alterations,
e.g., copy number gains or losses. Sporadic copy number alterations occur randomly throughout the
genome, whereas recurrent alterations are observed in the same genomic region across multiple
independent samples, perhaps because they provide a selective growth advantage.
This package implements the DiNAMIC procedure for assessing the statistical significance of
recurrent DNA copy number aberrations (Bioinformatics (2011) 27(5) 678 - 685).

Vonn Walter

dinamic

A Method to Analyze Recurrent DNA Copy Number Aberrations in
Tumors

Andrew B. Nobel

Fred A. Wright

recodeBinary function

<dl><dt>binary.vec</dt>
<dd>A binary vector of length <code>m</code> (&gt;= 1) whose <code>k</code>th entry is 1.</dd>
<dt>k</dt>
<dd>A positive integer.</dd></dl>

Arguments

Recode binary vectors — recodeBinary

<dl>

<dt>binary.vec</dt>
<dd>A binary vector of length <code>m</code> (&gt;= 1) whose <code>k</code>th entry is 1.</dd>


<dt>k</dt>
<dd>A positive integer.</dd>

</dl>

recodeBinary: Recode binary vectors

Description

Usage

Value

Arguments

Details

Examples