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diseasemapping (version 1.5.1)

Modelling Spatial Variation in Disease Risk for Areal Data

Description

Formatting of population and case data, calculation of Standardized Incidence Ratios, and fitting the BYM model using 'INLA'. For details see Brown (2015) .

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Version

Install

install.packages('diseasemapping')

Monthly Downloads

392

Version

1.5.1

License

GPL

Maintainer

Patrick Brown

Last Published

September 10th, 2021

Functions in diseasemapping (1.5.1)

diseasemapping-package

Disease Mapping

casedata

Data set contains the number of cases information

bym-methods

Fit the BYM model

cancerRates

Download cancer incidence rates from the International Agency for Research on Cancer (IARC)

formatPopulation-methods

Format a population data set

nbToInlaGraph

Write a graph file for INLA

formatCases

Format the disease case data set

popdata

Ontario 2006 population by census subdivision

inla.models

Valid models in INLA

kentucky

Larynx cancer cases and population in Kentucky

getSMR-methods

Calculate the standardized mortality/morbidity ratios

getStdRate

Calculate the standardized rate

referencepop

Standard Canadian population data set from year 1991.

getRates

Calculate the estimated coefficients of age and sex group from the glm model

getBreaks

Age Breaks