dismo v0.7-11

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Species distribution modeling

Functions for species distribution modeling, that is, predicting entire geographic distributions form occurences at specific sites.

Functions in dismo

Name Description
Circles Circles range
domain Domain
ecocrop Ecocrop model
biogeomancer Georeferencing
boxplot Box plot of model evaluation data
biovars bioclimatic variables
DistModel Class "DistModel"
dismo-package Species distribution modeling
bioclim Bioclim
Convex Hull Convex hull model
geocode Georeferencing with Google
gbif Data from GBIF
gbm.holdout gbm holdout
lookup lookup
pointValues point values
response response plots
mahal Mahalanobis model
gbm.plot gbm plot
Random null model Random null model
pwdSample Pair-wise distance sampling
maxent Maxent
gbm.simplify gbm simplify
gbm.step gbm step
plot Plot predictor values
evaluation plots Plot model evaluation data
shapefile read a shapefile
density density
Geographic Distance Geographic distance model
gbm.fixed gbm fixed
ModelEvaluation Class "ModelEvaluation"
ssb Spatial sorting bias
gmap Get a Google map
predict Distribution model predictions
Anguilla data Anguilla australis distribution data
gbm.interactions gbm interactions
pairs Pair plots
calc.deviance Calculate deviance
gbm.perspec gbm perspective plot
gbm.plot.fits gbm plot fitted values
gridSample Stratified regular sample on a grid
randomPoints Random points
Voronoi Hull Voronoi hull model
prepareData Prepare data for model fitting
acaule Solanum acaule data
InvDistW Inverse-distance weighted model
kfold k-fold partitioning
evaluate Model evaluation
evaluateROCR Model testing with the ROCR package
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Details

Type Package
Date 19-September-2011
License GPL (>= 3)
LazyLoad yes
Packaged 2011-10-20 05:50:21 UTC; rhijmans
Repository CRAN
Date/Publication 2011-10-20 08:47:27

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